ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5misA2 - ECOD Domain | ECOD

ECOD/Domains/e5misA2

e5misA2

UID: 002060953

PDB

Range: A:5-114,A:237-307
PDB: 5MIS chain A(all domains)
UniProt: A2RLJ5 (all domains)
Gene: trxB1

Molecule: Thioredoxin reductase

3D Structure

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Related Domains

Browse other domains in Pyr_redox_2+FAD_oxidored →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyPyr_redox_2+FAD_oxidored(2003.1.2.53)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461

Pfam Families

PF07992Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

ClanCL0063NADP_Rossmann

PF12831FAD_oxidored

FAD dependent oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5MIS RCSB PDB: 5MIS PDBe: 5MIS UniProt: A2RLJ5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 2 additives (Sulfate ion, DI(HYDROXYETHYL)ETHER)

Sulfate ionSO4
DrugBank DB14546within 5 Å only
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.