ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3jbd41 - ECOD Domain | ECOD

ECOD/Domains/e3jbd41

e3jbd41

UID: 002062680

PDB

Range: 4:1-69
PDB: 3JBD chain 4(all domains)
UniProt: P03300 (all domains)

Molecule: Capsid protein VP4

3D Structure

Loading viewer...

Related Domains

Browse other domains in Pico_P1A →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyPico_P1A(10.2.1.23)

Pfam Families

PF02226Pico_P1A

Picornavirus coat protein (VP4)

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 3JBD RCSB PDB: 3JBD PDBe: 3JBD UniProt: P03300

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure