ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ke3A3 - ECOD Domain | ECOD

ECOD/Domains/e5ke3A3

e5ke3A3

UID: 002062940

PDB

Range: A:347-399
PDB: 5KE3 chain A(all domains)
UniProt: Q15047 (all domains)
Gene: SETDB1

Molecule: Histone-lysine N-methyltransferase SETDB1

3D Structure

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Related Domains

Browse other domains in Tudor_4 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyTudor_4(4.1.1.128)

Ligands

in contact, ≤ 4 Å

MercaptoethanolBME
drugDrugBank DB03345
(S)-N-(furan-2-ylmethyl)-1-(1,2,3,4-tetrahydroisoquinoline-3-carbonyl)piperidine-4-carboxamide6S5
Unknown atom or ionUNX

Pfam Families

PF18358Tudor_4

Histone methyltransferase Tudor domain

ClanCL0010SH3

External Links

ECOD PDB View: 5KE3 RCSB PDB: 5KE3 PDBe: 5KE3 UniProt: Q15047

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.