ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5h3vB1 - ECOD Domain | ECOD

ECOD/Domains/e5h3vB1

e5h3vB1

UID: 002063581

PDB

Range: B:1-103
PDB: 5H3V chain B(all domains)
UniProt: O25263 (all domains)
Gene: HP_0528

Molecule: Cag8

3D Structure

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Related Domains

Browse other domains in CagX →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyCagX(11.1.1.59)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Conjugal transfer protein

ClanCL0159E-set

External Links

ECOD PDB View: 5H3V RCSB PDB: 5H3V PDBe: 5H3V UniProt: O25263

Downloads

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