ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nkkF1 - ECOD Domain | ECOD

ECOD/Domains/e5nkkF1

e5nkkF1

UID: 002067260

RepresentativePDB

Range: F:59-122,F:143-151,F:172-284,F:308-364
PDB: 5NKK chain F(all domains)
UniProt: Q9XWJ1 (all domains)
Gene: smg-9

Molecule: Protein smg-9

3D Structure

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Related Domains

Browse other domains in this classification →

Classification

AArchitecture—

XX-group—

HH-group—

TT-group—

FFamily—

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

External Links

ECOD PDB View: 5NKK RCSB PDB: 5NKK PDBe: 5NKK UniProt: Q9XWJ1

Downloads

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