ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5lzgC1 - ECOD Domain | ECOD

ECOD/Domains/e5lzgC1

e5lzgC1

UID: 002080319

PDB

Range: C:1-103
PDB: 5LZG chain C(all domains)
UniProt: P01556 (all domains)
Gene: ctxB

Molecule: Cholera enterotoxin subunit B

3D Structure

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Related Domains

Browse other domains in Enterotoxin_b →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupBacterial enterotoxins(2.2)

TT-groupBacterial enterotoxins(2.2.1)

FFamilyEnterotoxin_b(2.2.1.2)

Ligands

in contact, ≤ 4 Å

(2~{R},4~{S},5~{R},6~{R})-5-acetamido-2-[4-[3-[2-[(2~{S},3~{R},4~{R},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]ethylamino]-3-oxidanylidene-propyl]-1,2,3-triazol-1-yl]-4-oxidanyl-6-[(1~{R},2~{R})-1,2,3-tris(oxidanyl)propyl]oxane-2-carboxylic acid7BN

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Pfam Families

PF01376Enterotoxin_b

Heat-labile enterotoxin beta chain

ClanCL0658OB_enterotoxin

External Links

ECOD PDB View: 5LZG RCSB PDB: 5LZG PDBe: 5LZG UniProt: P01556

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.