ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5k0rA1 - ECOD Domain | ECOD

ECOD/Domains/e5k0rA1

e5k0rA1

UID: 002081035

PDB

Range: A:9-355
PDB: 5K0R chain A(all domains)
UniProt: Q8EBV3 (all domains)
Gene: sye4

Molecule: NAD(P)H:flavin oxidoreductase Sye4

3D Structure

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Related Domains

Browse other domains in Oxidored_FMN →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyOxidored_FMN(2002.1.1.32)

Ligands

in contact, ≤ 4 Å

Octadecane8K6
1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOLFNR

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00724Oxidored_FMN

NADH:flavin oxidoreductase / NADH oxidase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5K0R RCSB PDB: 5K0R PDBe: 5K0R UniProt: Q8EBV3

Downloads

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