ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xdoB1 - ECOD Domain | ECOD

ECOD/Domains/e5xdoB1

e5xdoB1

UID: 002085973

PDB

Range: B:1-281
PDB: 5XDO chain B(all domains)
UniProt: P21796 (all domains)
Gene: VDAC1

Molecule: Voltage-dependent anion-selective channel protein 1

3D Structure

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Related Domains

Browse other domains in Porin_3 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOuter membrane meander beta-barrels(5084)

HH-groupPorins(5084.5)

TT-groupPorin(5084.5.1)

FFamilyPorin_3(5084.5.1.3)

Ligands

in contact, ≤ 4 Å

SpermidineSPD
drugDrugBank DB03566
PentaneLNK
N-octaneOCT

Pfam Families

PF01459Porin_3

Eukaryotic porin

ClanCL0193MBB

External Links

ECOD PDB View: 5XDO RCSB PDB: 5XDO PDBe: 5XDO UniProt: P21796

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.