ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kotA1 - ECOD Domain | ECOD

ECOD/Domains/e5kotA1

e5kotA1

UID: 002088217

PDB

Range: A:186-340
PDB: 5KOT chain A(all domains)
UniProt: P00797 (all domains)
Gene: REN

Molecule: Renin

3D Structure

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Related Domains

Browse other domains in Asp →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyAsp(1.1.1.1)

Ligands

in contact, ≤ 4 Å

1-(4-methoxybutyl)-~{N}-(2-methylpropyl)-~{N}-[(3~{S},5~{R})-5-morpholin-4-ylcarbonylpiperidin-3-yl]benzimidazole-2-carboxamide6VU

+ 3 additives (Dimethyl sulfoxide, Triethylene glycol, DI(HYDROXYETHYL)ETHER)

Dimethyl sulfoxideDMS
DrugBank DB01093

Pfam Families

Eukaryotic aspartyl protease

ClanCL0129Peptidase_AA

External Links

ECOD PDB View: 5KOT RCSB PDB: 5KOT PDBe: 5KOT UniProt: P00797

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Triethylene glycol

DrugBank DB02327

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.