ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5vc8A1 - ECOD Domain | ECOD

ECOD/Domains/e5vc8A1

e5vc8A1

UID: 002089762

PDB

Range: A:216-346
PDB: 5VC8 chain A(all domains)
UniProt: O96028 (all domains)
Gene: NSD2

Molecule: Histone-lysine N-methyltransferase NSD2

3D Structure

Loading viewer...

Related Domains

Browse other domains in PWWP →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyPWWP(4.1.1.12)

Ligands

in contact, ≤ 4 Å

Unknown atom or ionUNX

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PWWP domain

ClanCL0010SH3

External Links

ECOD PDB View: 5VC8 RCSB PDB: 5VC8 PDBe: 5VC8 UniProt: O96028

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure