ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hudA1 - ECOD Domain | ECOD

ECOD/Domains/e5hudA1

e5hudA1

UID: 002097516

PDB

Range: A:29-472
PDB: 5HUD chain A(all domains)
UniProt: Q8NNL5 (all domains)
Gene: Cgl2178

Molecule: 3-Deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase

3D Structure

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Related Domains

Browse other domains in DAHP_synth_2 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDAHP_synth_2(2002.1.1.65)

Ligands

in contact, ≤ 4 Å

TryptophanTRP
drugDrugBank DB00150
MANGANESE (II) IONMN
metal

+ 3 additives (Glycerin, Phosphate ion, DI(HYDROXYETHYL)ETHER)

Pfam Families

PF01474DAHP_synth_2

Class-II DAHP synthetase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5HUD RCSB PDB: 5HUD PDBe: 5HUD UniProt: Q8NNL5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Phosphate ionPO4

DrugBank DB14523

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.