ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vvcD1 - ECOD Domain | ECOD

ECOD/Domains/e5vvcD1

e5vvcD1

UID: 002101501

PDB

Range: D:67-480
PDB: 5VVC chain D(all domains)
UniProt: P29474 (all domains)
Gene: NOS3

Molecule: Nitric oxide synthase, endothelial

3D Structure

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Related Domains

Browse other domains in NO_synthase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupNitric oxide (NO) synthase oxygenase domain(262)

HH-groupNitric oxide (NO) synthase oxygenase domain(262.1)

TT-groupNitric oxide (NO) synthase oxygenase domain(262.1.1)

FFamilyNO_synthase(262.1.1.1)

Ligands

in contact, ≤ 4 Å

SapropterinH4B
drugDrugBank DB00360
FerrohemeHEM
drugDrugBank DB18267
4-(2-{[(2-amino-4-methylquinolin-7-yl)methyl]amino}ethyl)-2-methylbenzonitrile

Pfam Families

PF02898NO_synthase

Nitric oxide synthase, oxygenase domain

External Links

ECOD PDB View: 5VVC RCSB PDB: 5VVC PDBe: 5VVC UniProt: P29474

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Chloride ionCL

Gadolinium atomGD

metal

Zinc ionZN

metal

+ 1 additive (2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL)

2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOLBTB

Shown in the structure viewer. Drug annotations from DrugDomain.