ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xnmH1 - ECOD Domain | ECOD

ECOD/Domains/e5xnmH1

e5xnmH1

UID: 002122084

PDB

Range: H:13-72
PDB: 5XNM chain H(all domains)
UniProt: Q9XQR3 (all domains)
Gene: psbH

Molecule: Photosystem II reaction center protein H

3D Structure

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Related Domains

Browse other domains in PsbH →

Classification

AArchitectureextended segments(a.20)

XX-groupPhotosystem II 10 kDa phosphoprotein PsbH(5032)

HH-groupPhotosystem II 10 kDa phosphoprotein PsbH(5032.1)

TT-groupPhotosystem II 10 kDa phosphoprotein PsbH(5032.1.1)

FFamilyPsbH(5032.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta caroteneBCR
drugDrugBank DB06755
Chlorophyll ACLA
drugDrugBank DB02133
Digalactosyl Diacyl Glycerol (Dgdg)

Pfam Families

Photosystem II 10 kDa phosphoprotein

External Links

ECOD PDB View: 5XNM RCSB PDB: 5XNM PDBe: 5XNM UniProt: Q9XQR3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB03426

1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROLSQD

Shown in the structure viewer. Drug annotations from DrugDomain.