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PDB 5XNM

ELECTRON MICROSCOPY54 chains54 ECOD domains
View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 1Chlorophyll a-b binding protein 8, chloroplasticview chain
1 domain
Chain 2Chlorophyll a-b binding protein 8, chloroplasticview chain
1 domain
Chain 3Chlorophyll a-b binding protein, chloroplasticview chain
1 domain
Chain 4Light harvesting chlorophyll a/b-binding protein Lhcb6, CP24view chain
1 domain
Chain 5Chlorophyll a-b binding protein 8, chloroplasticview chain
1 domain
Chain 6Chlorophyll a-b binding protein 8, chloroplasticview chain
1 domain
Chain 7Chlorophyll a-b binding protein, chloroplasticview chain
1 domain
Chain 8Light harvesting chlorophyll a/b-binding protein Lhcb6, CP24view chain
1 domain
Chain aPhotosystem II protein D1view chain
1 domain
Chain APhotosystem II protein D1view chain
1 domain
Chain bPhotosystem II CP47 reaction center proteinview chain
2 domains
Chain BPhotosystem II CP47 reaction center proteinview chain
2 domains
Chain cPhotosystem II CP43 reaction center proteinview chain
1 domain
Chain CPhotosystem II CP43 reaction center proteinview chain
1 domain
Chain dPhotosystem II D2 proteinview chain
1 domain
Chain DPhotosystem II D2 proteinview chain
1 domain
Chain eCytochrome b559 subunit alphaview chain
1 domain
Chain ECytochrome b559 subunit alphaview chain
1 domain
Chain fCytochrome b559 subunit beta, PsbFview chain
1 domain
Chain FCytochrome b559 subunit beta, PsbFview chain
1 domain
Chain gChlorophyll a-b binding protein 8, chloroplasticview chain
1 domain
Chain GChlorophyll a-b binding protein 8, chloroplasticview chain
1 domain
Chain hPhotosystem II reaction center protein Hview chain
1 domain
Chain HPhotosystem II reaction center protein Hview chain
1 domain
Chain iPhotosystem II reaction center protein I, PsbIview chain
1 domain
Chain IPhotosystem II reaction center protein I, PsbIview chain
1 domain
Chain jPhotosystem II reaction center protein Jview chain
1 domain
Chain JPhotosystem II reaction center protein Jview chain
1 domain
Chain kPhotosystem II reaction center protein Kview chain
1 domain
Chain KPhotosystem II reaction center protein Kview chain
1 domain
Chain lPhotosystem II reaction center protein Lview chain
1 domain
Chain LPhotosystem II reaction center protein Lview chain
1 domain
Chain mPhotosystem II reaction center protein Mview chain
1 domain
Chain MPhotosystem II reaction center protein Mview chain
1 domain
Chain nChlorophyll a-b binding protein 8, chloroplasticview chain
1 domain
Chain NChlorophyll a-b binding protein 8, chloroplasticview chain
1 domain
Chain oOxygen-evolving enhancer protein 1, chloroplasticview chain
1 domain
Chain OOxygen-evolving enhancer protein 1, chloroplasticview chain
1 domain
Chain rLight harvesting chlorophyll a/b-binding protein Lhcb4, CP29view chain
1 domain
Chain RLight harvesting chlorophyll a/b-binding protein Lhcb4, CP29view chain
1 domain
Chain sLight harvesting chlorophyll a/b-binding protein Lhcb5, CP26view chain
1 domain
Chain SLight harvesting chlorophyll a/b-binding protein Lhcb5, CP26view chain
1 domain
Chain tPhotosystem II reaction center protein Tview chain
1 domain
Chain TPhotosystem II reaction center protein Tview chain
1 domain
Chain wPhotosystem II reaction center protein W, PSBWview chain
1 domain
Chain WPhotosystem II reaction center protein W, PSBWview chain
1 domain
Chain xPhotosystem II reaction center protein Xview chain
1 domain
Chain XPhotosystem II reaction center protein Xview chain
1 domain
Chain yChlorophyll a-b binding protein 8, chloroplasticview chain
1 domain
Chain YChlorophyll a-b binding protein 8, chloroplasticview chain
1 domain
Chain zPhotosystem II reaction center protein Zview chain
1 domain
Chain ZPhotosystem II reaction center protein Zview chain
1 domain

All Domains (54)

#ChainDomain IDRangeFamilyClassification
11e5xnm111:13-231Chloroa_b-bind5077 → 5077.1 → 5077.1.1
22e5xnm212:14-231Chloroa_b-bind5077 → 5077.1 → 5077.1.1
33e5xnm313:23-242Chloroa_b-bind5077 → 5077.1 → 5077.1.1
44e5xnm414:5-209Chloroa_b-bind5077 → 5077.1 → 5077.1.1
55e5xnm515:13-231Chloroa_b-bind5077 → 5077.1 → 5077.1.1
66e5xnm616:14-231Chloroa_b-bind5077 → 5077.1 → 5077.1.1
77e5xnm717:23-242Chloroa_b-bind5077 → 5077.1 → 5077.1.1
88e5xnm818:5-209Chloroa_b-bind5077 → 5077.1 → 5077.1.1
9ae5xnma1a:11-344Photo_RC5037 → 5037.1 → 5037.1.1
10Ae5xnmA1A:11-344Photo_RC5037 → 5037.1 → 5037.1.1
11be5xnmb1b:329-444PSII3744 → 3744.1 → 3744.1.1
12be5xnmb2b:2-328,b:445-504PSII5075 → 5075.1 → 5075.1.1
13Be5xnmB1B:329-444PSII3744 → 3744.1 → 3744.1.1
14Be5xnmB2B:2-328,B:445-504PSII5075 → 5075.1 → 5075.1.1
15ce5xnmc1c:24-473PSII5075 → 5075.1 → 5075.1.1
16Ce5xnmC1C:24-473PSII5075 → 5075.1 → 5075.1.1
17de5xnmd1d:13-352Photo_RC5037 → 5037.1 → 5037.1.1
18De5xnmD1D:13-352Photo_RC5037 → 5037.1 → 5037.1.1
19ee5xnme1e:8-82Cytochrom_B559,Cytochrom_B559a5036 → 5036.1 → 5036.1.1
20Ee5xnmE1E:8-82Cytochrom_B559,Cytochrom_B559a5036 → 5036.1 → 5036.1.1
21fe5xnmf1f:10-39Cytochrom_B5595036 → 5036.1 → 5036.1.1
22Fe5xnmF1F:10-39Cytochrom_B5595036 → 5036.1 → 5036.1.1
23ge5xnmg1g:13-231Chloroa_b-bind5077 → 5077.1 → 5077.1.1
24Ge5xnmG1G:13-231Chloroa_b-bind5077 → 5077.1 → 5077.1.1
25he5xnmh1h:13-72PsbH5032 → 5032.1 → 5032.1.1
26He5xnmH1H:13-72PsbH5032 → 5032.1 → 5032.1.1
27ie5xnmi1i:1-34PsbI5035 → 5035.1 → 5035.1.1
28Ie5xnmI1I:1-34PsbI5035 → 5035.1 → 5035.1.1
29je5xnmj1j:6-39PsbJ5031 → 5031.1 → 5031.1.1
30Je5xnmJ1J:6-39PsbJ5031 → 5031.1 → 5031.1.1
31ke5xnmk1k:25-61PsbK5034 → 5034.1 → 5034.1.1
32Ke5xnmK1K:25-61PsbK5034 → 5034.1 → 5034.1.1
33le5xnml1l:2-38PsbL5030 → 5030.1 → 5030.1.1
34Le5xnmL1L:2-38PsbL5030 → 5030.1 → 5030.1.1
35me5xnmm1m:1-33PsbM5033 → 5033.1 → 5033.1.1
36Me5xnmM1M:1-33PsbM5033 → 5033.1 → 5033.1.1
37ne5xnmn1n:13-231Chloroa_b-bind5077 → 5077.1 → 5077.1.1
38Ne5xnmN1N:13-231Chloroa_b-bind5077 → 5077.1 → 5077.1.1
39oe5xnmo1o:1-159,o:194-248MSP5084 → 5084.1 → 5084.1.1
40Oe5xnmO1O:1-159,O:194-248MSP5084 → 5084.1 → 5084.1.1
41re5xnmr1r:11-244Chloroa_b-bind5077 → 5077.1 → 5077.1.1
42Re5xnmR1R:11-244Chloroa_b-bind5077 → 5077.1 → 5077.1.1
43se5xnms1s:19-236Chloroa_b-bind5077 → 5077.1 → 5077.1.1
44Se5xnmS1S:19-236Chloroa_b-bind5077 → 5077.1 → 5077.1.1
45te5xnmt1t:1-32PsbT3390 → 3390.1 → 3390.1.1
46Te5xnmT1T:1-32PsbT3390 → 3390.1 → 3390.1.1
47we5xnmw1w:1-54PsbW1084 → 1084.1 → 1084.1.1
48We5xnmW1W:1-54PsbW1084 → 1084.1 → 1084.1.1
49xe5xnmx1x:45-83PsbX3493 → 3493.1 → 3493.1.1
50Xe5xnmX1X:45-83PsbX3493 → 3493.1 → 3493.1.1
51ye5xnmy1y:13-231Chloroa_b-bind5077 → 5077.1 → 5077.1.1
52Ye5xnmY1Y:13-231Chloroa_b-bind5077 → 5077.1 → 5077.1.1
53ze5xnmz1z:1-62Ycf95044 → 5044.1 → 5044.1.1
54Ze5xnmZ1Z:1-62Ycf95044 → 5044.1 → 5044.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors