ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xnmO1 - ECOD Domain | ECOD

ECOD/Domains/e5xnmO1

e5xnmO1

UID: 002122096

PDB

Range: O:1-159,O:194-248
PDB: 5XNM chain O(all domains)
UniProt: P14226 (all domains)
Gene: PSBO

Molecule: Oxygen-evolving enhancer protein 1, chloroplastic

3D Structure

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Related Domains

Browse other domains in MSP →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOuter membrane meander beta-barrels(5084)

HH-groupOMPA-like(5084.1)

TT-groupOMPA-like(5084.1.1)

FFamilyMSP(5084.1.1.3)

Ligands

in contact, ≤ 4 Å

Digalactosyl Diacyl Glycerol (Dgdg)DGD
drugDrugBank DB03426
1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDELMG
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Manganese-stabilising protein / photosystem II polypeptide

ClanCL0193MBB

External Links

ECOD PDB View: 5XNM RCSB PDB: 5XNM PDBe: 5XNM UniProt: P14226

Downloads

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