ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5wm1A1 - ECOD Domain | ECOD

ECOD/Domains/e5wm1A1

e5wm1A1

UID: 002133172

PDB

Range: A:610-738
PDB: 5WM1 chain A(all domains)
UniProt: P12689 (all domains)
Gene: REV1

Molecule: DNA repair protein REV1

3D Structure

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Related Domains

Browse other domains in IMS_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupReverse ferredoxin(302)

HH-groupLesion bypass DNA polymerase (Y-family), little finger domain(302.1)

TT-groupLesion bypass DNA polymerase (Y-family), little finger domain(302.1.1)

FFamilyIMS_C(302.1.1.1)

Ligands

in contact, ≤ 4 Å

1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENEBAP
drugDrugBank DB07435

+ 3 additives (1,2-ETHANEDIOL, Glycerol, DI(HYDROXYETHYL)ETHER)

1,2-ETHANEDIOLEDO
Glycerol

Pfam Families

impB/mucB/samB family C-terminal domain

External Links

ECOD PDB View: 5WM1 RCSB PDB: 5WM1 PDBe: 5WM1 UniProt: P12689

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.