ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nj2B1 - ECOD Domain | ECOD

ECOD/Domains/e5nj2B1

e5nj2B1

UID: 002146137

PDB

Range: B:29-66,B:183-294
PDB: 5NJ2 chain B(all domains)
UniProt: P9WKD3 (all domains)
Gene: blaC

Molecule: Beta-lactamase

3D Structure

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Related Domains

Browse other domains in Beta-lactamase2 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3)

TT-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3.1)

FFamilyBeta-lactamase2(223.3.1.8)

Ligands

in contact, ≤ 4 Å

3,6,9,12,15-PENTAOXAHEPTADECAN-1-OLAE4
drugDrugBank DB07344
2-{2-[2-2-(Methoxy-Ethoxy)-Ethoxy]-Ethoxy}-EthanolETE
drugDrugBank DB04332

Pfam Families

PF13354Beta-lactamase2

Beta-lactamase enzyme family

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 5NJ2 RCSB PDB: 5NJ2 PDBe: 5NJ2 UniProt: P9WKD3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 2 additives (Acetate, Phosphate ion)

AcetateACT
DrugBank DB14511
Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.