ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5mzeD1 - ECOD Domain | ECOD

ECOD/Domains/e5mzeD1

e5mzeD1

UID: 002151902

PDB

Range: D:3-156
PDB: 5MZE chain D(all domains)
UniProt: P53368 (all domains)
Gene: Nudt1

Molecule: 7,8-dihydro-8-oxoguanine triphosphatase

3D Structure

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Related Domains

Browse other domains in NUDIX →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupNudix(221.4)

TT-groupNudix(221.4.1)

FFamilyNUDIX(221.4.1.1)

Ligands

in contact, ≤ 4 Å

8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE8DG

+ 2 additives (Glycerin, DI(HYDROXYETHYL)ETHER)

GlycerinGOL
DrugBank DB09462
DI(HYDROXYETHYL)ETHERPEG

Pfam Families

NUDIX domain

ClanCL0261NUDIX

External Links

ECOD PDB View: 5MZE RCSB PDB: 5MZE PDBe: 5MZE UniProt: P53368

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.