ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xwcA2 - ECOD Domain | ECOD

ECOD/Domains/e5xwcA2

e5xwcA2

UID: 002170227

PDB

Range: A:175-460
PDB: 5XWC chain A(all domains)
UniProt: B6V7E4 (all domains)

Molecule: Glutamate dehydrogenase

3D Structure

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Related Domains

Browse other domains in ELFV_dehydrog →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyELFV_dehydrog(2003.1.1.7)

Ligands

in contact, ≤ 4 Å

Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461
(2Z)-2-iminopentanedioic acid2IT
(2S)-2-azanyl-2-oxidanyl-pentanedioic acid8GL

Pfam Families

PF00208ELFV_dehydrog

Glutamate/Leucine/Phenylalanine/Valine dehydrogenase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5XWC RCSB PDB: 5XWC PDBe: 5XWC UniProt: B6V7E4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 2 additives (Glycerol, DI(HYDROXYETHYL)ETHER)

GlycerolGOL
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.