ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5teeA1 - ECOD Domain | ECOD

ECOD/Domains/e5teeA1

e5teeA1

UID: 002323934

RepresentativePDB

Range: A:3-379
PDB: 5TEE chain A(all domains)
UniProt: Q8TEQ6 (all domains)
Gene: GEMIN5

Molecule: Gem-associated protein 5

3D Structure

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Related Domains

Browse other domains in Beta-prop_RIG_1st →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyBeta-prop_RIG_1st(5.1.4.620)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
Unknown atom or ionUNX

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF23770Beta-prop_RIG_1st

RIG first beta-propeller

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 5TEE RCSB PDB: 5TEE PDBe: 5TEE UniProt: Q8TEQ6

Downloads

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