ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5m45J3 - ECOD Domain | ECOD

ECOD/Domains/e5m45J3

e5m45J3

UID: 002326436

PDB

Range: J:267-424
PDB: 5M45 chain J(all domains)
UniProt: Q8RM03 (all domains)
Gene: acxB

Molecule: Acetone carboxylase alpha subunit

3D Structure

Loading viewer...

Related Domains

Browse other domains in Hydantoinase_B →

Classification

AArchitecturea+b two layers(a.11)

XX-groupMocoBD/DmpA-related(231)

HH-groupMocoBD/DmpA-related(231.1)

TT-groupApc (acetophenone carboxylase) beta subunit middle domain(231.1.4)

FFamilyHydantoinase_B(231.1.4.1)

Ligands

in contact, ≤ 4 Å

3,6,9,12,15-PENTAOXAHEPTADECAN-1-OLAE4
drugDrugBank DB07344
Magnesium ionMG
metalwithin 5 Å only
MANGANESE (II) ION

Pfam Families

PF02538Hydantoinase_B

Hydantoinase B/oxoprolinase

External Links

ECOD PDB View: 5M45 RCSB PDB: 5M45 PDBe: 5M45 UniProt: Q8RM03

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metalwithin 5 Å only

+ 1 additive (Acetate ion)

Acetate ionACT

Shown in the structure viewer. Drug annotations from DrugDomain.