ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4eawA2 - ECOD Domain | ECOD

ECOD/Domains/e4eawA2

e4eawA2

UID: 000235768

PDB

Range: A:1-357
PDB: 4EAW chain A(all domains)
UniProt: O92972 (all domains)

Molecule: RNA-directed RNA polymerase

3D Structure

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Related Domains

Browse other domains in RdRP_3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRdRP_3(304.48.1.15)

Ligands

in contact, ≤ 4 Å

N-{(1S)-3-[(5S)-5-tert-butyl-1-(3,3-dimethylbutyl)-4-hydroxy-2-oxo-2,5-dihydro-1H-pyrrol-3-yl]-1-ethoxy-1-oxido-1,4-dihydro-2,4,1-benzodiazaphosphinin-7-yl}methanesulfonamide0NQ

+ 3 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Sulfate ion)

1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHER

Pfam Families

Viral RNA dependent RNA polymerase

ClanCL0027RdRP

External Links

ECOD PDB View: 4EAW RCSB PDB: 4EAW PDBe: 4EAW UniProt: O92972

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.