ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ookB1 - ECOD Domain | ECOD

ECOD/Domains/e5ookB1

e5ookB1

UID: 002388409

PDB

Range: B:1-174
PDB: 5OOK chain B(all domains)
UniProt: A8ZMJ5 (all domains)
Gene: cpcB

Molecule: Phycocyanin, beta subunit

3D Structure

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Related Domains

Browse other domains in Phycobilisome →

Classification

AArchitecturealpha arrays(a.6)

XX-groupGlobin-like(106)

HH-groupGlobin-like(106.1)

TT-groupGlobin-like(106.1.1)

FFamilyPhycobilisome(106.1.1.2)

Ligands

in contact, ≤ 4 Å

PhycocyanobilinCYC

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00502Phycobilisome

Phycobilisome protein

ClanCL0090Globin

External Links

ECOD PDB View: 5OOK RCSB PDB: 5OOK PDBe: 5OOK UniProt: A8ZMJ5

Downloads

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