ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5zjiF1 - ECOD Domain | ECOD

ECOD/Domains/e5zjiF1

e5zjiF1

UID: 002388528

PDB

Range: F:67-224
PDB: 5ZJI chain F(all domains)
UniProt: B6SRI3 (all domains)
Gene: ZEAMMB73_Zm00001d034283

Molecule: Photosystem I reaction center subunit III

3D Structure

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Related Domains

Browse other domains in PSI_PsaF →

Classification

AArchitectureextended segments(a.20)

XX-groupSubunit III of photosystem I reaction centre, PsaF(5019)

HH-groupSubunit III of photosystem I reaction centre, PsaF(5019.1)

TT-groupSubunit III of photosystem I reaction centre, PsaF(5019.1.1)

FFamilyPSI_PsaF(5019.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta caroteneBCR
drugDrugBank DB06755
Chlorophyll ACLA
drugDrugBank DB02133
Digalactosyl Diacyl Glycerol (Dgdg)

Pfam Families

PF02507PSI_PsaF

Photosystem I reaction centre subunit III

External Links

ECOD PDB View: 5ZJI RCSB PDB: 5ZJI PDBe: 5ZJI UniProt: B6SRI3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB03426

(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOLLUT

drugDrugBank DB00137

ViolaxanthinXAT

drugDrugBank DB03460

1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDELMG

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.