ECODEvolutionary Classification of Protein Domains

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PDB 5ZJI

ELECTRON MICROSCOPY21 chains22 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 1Chlorophyll a-b binding protein, chloroplasticview chain

1 domain

e5zji11(1:48-243)

Chain 2Chlorophyll a-b binding protein, chloroplasticview chain

1 domain

e5zji21(2:62-268)

Chain 3Chlorophyll a-b binding protein, chloroplasticview chain

1 domain

e5zji31(3:47-267)

Chain 4Chlorophyll a-b binding protein, chloroplasticview chain

1 domain

e5zji41(4:54-252)

Chain APhotosystem I P700 chlorophyll a apoprotein A1view chain

2 domains

e5zjiA1(A:9-411)e5zjiA2(A:412-750)

Chain BPhotosystem I P700 chlorophyll a apoprotein A2view chain

2 domains

e5zjiB1(B:2-404)e5zjiB2(B:405-734)

Chain Cphotosystem I subunit VIIview chain

1 domain

e5zjiC1(C:1-81)

Chain DPhotosystem I reaction center subunit IIview chain

1 domain

e5zjiD1(D:58-199)

Chain EPhotosystem I reaction center subunit IV Aview chain

1 domain

e5zjiE1(E:69-136)

Chain FPhotosystem I reaction center subunit IIIview chain

1 domain

e5zjiF1(F:67-224)

Chain GPhotosystem I reaction center subunit Vview chain

1 domain

e5zjiG1(G:49-145)

Chain HPhotosystem I reaction center subunit VI, chloroplasticview chain

1 domain

e5zjiH1(H:48-142)

Chain IPhotosystem I reaction center subunit VIIIview chain

1 domain

e5zjiI1(I:2-34)

Chain JPhotosystem I reaction center subunit IXview chain

1 domain

e5zjiJ1(J:1-41)

Chain KPhotosystem I reaction center subunit psaKview chain

1 domain

e5zjiK1(K:47-130)

Chain LPhotosystem I reaction center subunit XIview chain

1 domain

e5zjiL1(L:45-210)

Chain NPhotosystem I reaction center subunit Nview chain

1 domain

e5zjiN1(N:62-145)

Chain XChlorophyll a-b binding protein 1, chloroplasticview chain

1 domain

e5zjiX1(X:14-231)

Chain YChlorophyll a-b binding protein, chloroplasticview chain

1 domain

e5zjiY1(Y:1-228)

Chain ZChlorophyll a-b binding protein 1, chloroplasticview chain

1 domain

e5zjiZ1(Z:14-231)

All Domains (22)

#	Chain	Domain ID	Range	Family	Classification
1	1	e5zji11	1:48-243	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
2	2	e5zji21	2:62-268	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
3	3	e5zji31	3:47-267	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
4	4	e5zji41	4:54-252	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
5	A	e5zjiA1	A:9-411	PsaA_PsaB	5075 → 5075.1 → 5075.1.1
6	A	e5zjiA2	A:412-750	PsaA_PsaB	5037 → 5037.1 → 5037.1.1
7	B	e5zjiB1	B:2-404	PsaA_PsaB	5075 → 5075.1 → 5075.1.1
8	B	e5zjiB2	B:405-734	PsaA_PsaB	5037 → 5037.1 → 5037.1.1
9	C	e5zjiC1	C:1-81	Fer4+Fer4_7	205 → 205.1 → 205.1.1
10	D	e5zjiD1	D:58-199	PsaD	834 → 834.1 → 834.1.1
11	E	e5zjiE1	E:69-136	PSI_PsaE	4 → 4.1 → 4.1.1
12	F	e5zjiF1	F:67-224	PSI_PsaF	5019 → 5019.1 → 5019.1.1
13	G	e5zjiG1	G:49-145	PSI_PSAK	5063 → 5063.1 → 5063.1.1
14	H	e5zjiH1	H:48-142	PSI_PsaH	6037 → 6037.1 → 6037.1.1
15	I	e5zjiI1	I:2-34	PSI_8	5020 → 5020.1 → 5020.1.1
16	J	e5zjiJ1	J:1-41	PSI_PsaJ	5021 → 5021.1 → 5021.1.1
17	K	e5zjiK1	K:47-130	PSI_PSAK	5063 → 5063.1 → 5063.1.1
18	L	e5zjiL1	L:45-210	PsaL	5064 → 5064.1 → 5064.1.1
19	N	e5zjiN1	N:62-145	PsaN	6036 → 6036.1 → 6036.1.1
20	X	e5zjiX1	X:14-231	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
21	Y	e5zjiY1	Y:1-228	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
22	Z	e5zjiZ1	Z:14-231	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors