ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6damA1 - ECOD Domain | ECOD

ECOD/Domains/e6damA1

e6damA1

UID: 002392027

PDB

Range: A:27-570,A:599-617
PDB: 6DAM chain A(all domains)
UniProt: A0A3F2YLY8 (all domains)
Gene: xoxF

Molecule: Lanthanide-dependent methanol dehydrogenase XoxF

3D Structure

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Related Domains

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Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group8-bladed(5.1.5)

FFamilyPQQ(5.1.5.7)

Ligands

in contact, ≤ 4 Å

Pyrroloquinoline QuinonePQQ
drugDrugBank DB03205
LANTHANUM (III) IONLA
metal
Sodium ion

Pfam Families

Glucose/ethanol/alcohol dehydrogenase, beta-propeller domain

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 6DAM RCSB PDB: 6DAM PDBe: 6DAM UniProt: A0A3F2YLY8

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.