ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6dlxA1 - ECOD Domain | ECOD

ECOD/Domains/e6dlxA1

e6dlxA1

UID: 002398792

PDB

Range: A:285-494
PDB: 6DLX chain A(all domains)
UniProt: P10121 (all domains)
Gene: ftsY

Molecule: Signal recognition particle receptor FtsY

3D Structure

Loading viewer...

Related Domains

Browse other domains in SRP54 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySRP54(2004.1.1.43)

Ligands

in contact, ≤ 4 Å

4-bromo-2,5-dimethoxyanilineGXY

+ 2 additives (Ammonium ion, DI(HYDROXYETHYL)ETHER)

Ammonium ionNH4
DI(HYDROXYETHYL)ETHERPEG

Pfam Families

SRP54-type protein, GTPase domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 6DLX RCSB PDB: 6DLX PDBe: 6DLX UniProt: P10121

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.