ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6e88O1 - ECOD Domain | ECOD

ECOD/Domains/e6e88O1

e6e88O1

UID: 002399962

PDB

Range: O:1-243
PDB: 6E88 chain O(all domains)
UniProt: P52275 (all domains)
Gene: tbb-2

Molecule: Tubulin beta-2 chain

3D Structure

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Related Domains

Browse other domains in Tubulin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupTubulin nucleotide-binding domain-like(2003.1.6)

FFamilyTubulin(2003.1.6.1)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00091Tubulin

Tubulin/FtsZ family, GTPase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6E88 RCSB PDB: 6E88 PDBe: 6E88 UniProt: P52275

Downloads

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