ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6eq9A1 - ECOD Domain | ECOD

ECOD/Domains/e6eq9A1

e6eq9A1

UID: 002400380

PDB

Range: A:46-400
PDB: 6EQ9 chain A(all domains)
UniProt: P53779 (all domains)
Gene: MAPK10

Molecule: Mitogen-activated protein kinase 10

3D Structure

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Related Domains

Browse other domains in Pkinase, Kdo →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPkinase, Kdo(206.1.1.71)

Ligands

in contact, ≤ 4 Å

Adenosine-5'-[Beta, Gamma-Methylene]TriphosphateACP
drugDrugBank DB03909
MercaptoethanolBME
drugDrugBank DB03345

Pfam Families

PF00069Pkinase

Protein kinase domain

ClanCL0016PKinase

Lipopolysaccharide kinase (Kdo/WaaP) family

ClanCL0016PKinase

External Links

ECOD PDB View: 6EQ9 RCSB PDB: 6EQ9 PDBe: 6EQ9 UniProt: P53779

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

N-Dodecyl-N,N-Dimethyl-3-Ammonio-1-PropanesulfonateC15

drugDrugBank DB02643

Magnesium ionMG

metal

Sodium ionNA

metal

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.