ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6fqxE1 - ECOD Domain | ECOD

ECOD/Domains/e6fqxE1

e6fqxE1

UID: 002401269

PDB

Range: E:1-175
PDB: 6FQX chain E(all domains)
UniProt: Q8IKT2 (all domains)
Gene: PF3D7_1454700

Molecule: 6-phosphogluconate dehydrogenase, decarboxylating

3D Structure

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Related Domains

Browse other domains in NAD_binding_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyNAD_binding_2(2003.1.1.42)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerol, DI(HYDROXYETHYL)ETHER)

GlycerolGOL
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03446NAD_binding_2

NAD binding domain of 6-phosphogluconate dehydrogenase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6FQX RCSB PDB: 6FQX PDBe: 6FQX UniProt: Q8IKT2

Downloads

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