ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ekkB1 - ECOD Domain | ECOD

ECOD/Domains/e6ekkB1

e6ekkB1

UID: 002409434

PDB

Range: B:2-159
PDB: 6EKK chain B(all domains)
UniProt: Q8TEH3 (all domains)
Gene: DENND1A

Molecule: DENN domain-containing protein 1A

3D Structure

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Related Domains

Browse other domains in DENN,uDENN →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupprofilin-like(223.2)

TT-groupprofilin-like(223.2.1)

FFamilyDENN,uDENN(223.2.1.4)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315within 5 Å only

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4
DrugBank DB14546

Pfam Families

DENN (AEX-3) domain

ClanCL0330AVL9

uDENN domain

ClanCL0431PF

External Links

ECOD PDB View: 6EKK RCSB PDB: 6EKK PDBe: 6EKK UniProt: Q8TEH3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.