ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ekkC1 - ECOD Domain | ECOD

ECOD/Domains/e6ekkC1

e6ekkC1

UID: 002409436

PDB

Range: C:3-178
PDB: 6EKK chain C(all domains)
UniProt: Q15286 (all domains)
Gene: RAB35

Molecule: Ras-related protein Rab-35

3D Structure

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Related Domains

Browse other domains in Ras →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyRas(2004.1.1.19)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4
DrugBank DB14546

Pfam Families

Ras family

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 6EKK RCSB PDB: 6EKK PDBe: 6EKK UniProt: Q15286

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.