ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ynaA5 - ECOD Domain | ECOD

ECOD/Domains/e5ynaA5

e5ynaA5

UID: 002409693

PDB

Range: A:403-481,A:555-964
PDB: 5YNA chain A(all domains)
UniProt: W9BQ28 (all domains)

Molecule: PulA protein

3D Structure

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Related Domains

Browse other domains in Pullul_strch_C →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPullul_strch_C(2002.1.1.162)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 3 additives (Acetate, Glycerin, DI(HYDROXYETHYL)ETHER)

AcetateACT
DrugBank DB14511
GlycerinGOL

Pfam Families

PF11852Pullul_strch_C

Alpha-1,6-glucosidases, pullulanase-type, C-terminal

ClanCL0369GHD

External Links

ECOD PDB View: 5YNA RCSB PDB: 5YNA PDBe: 5YNA UniProt: W9BQ28

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.