ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5y2fA2 - ECOD Domain | ECOD

ECOD/Domains/e5y2fA2

e5y2fA2

UID: 002410118

PDB

Range: A:1-132,A:184-297
PDB: 5Y2F chain A(all domains)
UniProt: Q8N6T7 (all domains)
Gene: SIRT6

Molecule: NAD-dependent protein deacetylase sirtuin-6

3D Structure

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Related Domains

Browse other domains in SIR2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupDHS-like NAD/FAD-binding domain(2003.1.4)

FFamilySIR2(2003.1.4.5)

Ligands

in contact, ≤ 4 Å

Adenosine-5-DiphosphoriboseAR6
drugDrugBank DB02059
5-[[3,5-bis(chloranyl)phenyl]sulfonylamino]-2-[(5-bromanyl-4-fluoranyl-2-methyl-phenyl)sulfamoyl]benzoic acid8L9

Pfam Families

Sir2 family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5Y2F RCSB PDB: 5Y2F PDBe: 5Y2F UniProt: Q8N6T7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

HEXADECANE-1-SULFINIC ACID

+ 3 additives (Glycerin, Sulfate ion, DI(HYDROXYETHYL)ETHER)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.