ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6h77R1 - ECOD Domain | ECOD

ECOD/Domains/e6h77R1

e6h77R1

UID: 002414540

PDB

Range: R:1-78
PDB: 6H77 chain R(all domains)
UniProt: P61960 (all domains)
Gene: UFM1

Molecule: Ubiquitin-fold modifier 1

3D Structure

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Related Domains

Browse other domains in Ufm1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyUfm1(221.1.1.22)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Ubiquitin fold modifier 1 protein

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 6H77 RCSB PDB: 6H77 PDBe: 6H77 UniProt: P61960

Downloads

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