ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yneA6 - ECOD Domain | ECOD

ECOD/Domains/e5yneA6

e5yneA6

UID: 002417303

PDB

Range: A:403-481,A:555-964
PDB: 5YNE chain A(all domains)
UniProt: W9BQ28 (all domains)

Molecule: PulA protein

3D Structure

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Related Domains

Browse other domains in Pullul_strch_C →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPullul_strch_C(2002.1.1.162)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 2 additives (Glycerin, DI(HYDROXYETHYL)ETHER)

GlycerinGOL
DrugBank DB09462
DI(HYDROXYETHYL)ETHERPEG

Pfam Families

PF11852Pullul_strch_C

Alpha-1,6-glucosidases, pullulanase-type, C-terminal

ClanCL0369GHD

External Links

ECOD PDB View: 5YNE RCSB PDB: 5YNE PDBe: 5YNE UniProt: W9BQ28

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.