ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6h7yA2 - ECOD Domain | ECOD

ECOD/Domains/e6h7yA2

e6h7yA2

UID: 002426832

PDB

Range: A:594-750
PDB: 6H7Y chain A(all domains)
UniProt: Q04609 (all domains)
Gene: FOLH1

Molecule: Glutamate carboxypeptidase 2

3D Structure

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Related Domains

Browse other domains in TFR_dimer →

Classification

AArchitecturealpha bundles(a.7)

XX-groupN-cbl like(611)

HH-groupTransferrin receptor ectodomain, C-terminal domain(611.1)

TT-groupTransferrin receptor ectodomain, C-terminal domain(611.1.1)

FFamilyTFR_dimer(611.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only
(2~{S})-2-[[(2~{S})-6-[(4-fluorophenyl)amino]-1-oxidanyl-1,6-bis(oxidanylidene)hexan-2-yl]carbamoylamino]pentanedioic acidFVZ

+ 3 additives (Triethylene glycol, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

Pfam Families

PF04253TFR_dimer

Transferrin receptor-like dimerisation domain

External Links

ECOD PDB View: 6H7Y RCSB PDB: 6H7Y PDBe: 6H7Y UniProt: Q04609

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Triethylene glycolPGE
DrugBank DB02327
1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.