ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4txkA3 - ECOD Domain | ECOD

ECOD/Domains/e4txkA3

e4txkA3

UID: 002427245

PDB

Range: A:7-237,A:366-487
PDB: 4TXK chain A(all domains)
UniProt: Q8VDP3 (all domains)
Gene: Mical1

Molecule: Protein-methionine sulfoxide oxidase MICAL1

3D Structure

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Related Domains

Browse other domains in FAD_binding_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyFAD_binding_3(2003.1.2.15)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01494FAD_binding_3

FAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4TXK RCSB PDB: 4TXK PDBe: 4TXK UniProt: Q8VDP3

Downloads

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