ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6i7vD31 - ECOD Domain | ECOD

ECOD/Domains/e6i7vD31

e6i7vD31

UID: 002428506

PDB

Range: D3:1-46
PDB: 6I7V chain D3(all domains)
UniProt: P0A7P5 (all domains)
Gene: rpmH

Molecule: 50S ribosomal protein L34

3D Structure

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Related Domains

Browse other domains in Ribosomal_L34 →

Classification

AArchitectureextended segments(a.20)

XX-group50S ribosomal protein L34(3074)

HH-group50S ribosomal protein L34(3074.1)

TT-group50S ribosomal protein L34(3074.1.1)

FFamilyRibosomal_L34(3074.1.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 2 additives (Triethylene glycol, DI(HYDROXYETHYL)ETHER)

Triethylene glycolPGE
DrugBank DB02327
DI(HYDROXYETHYL)ETHERPEG

Pfam Families

PF00468Ribosomal_L34

Ribosomal protein L34

External Links

ECOD PDB View: 6I7V RCSB PDB: 6I7V PDBe: 6I7V UniProt: P0A7P5

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.