ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6gncA1 - ECOD Domain | ECOD

ECOD/Domains/e6gncA1

e6gncA1

UID: 002430531

PDB

Range: A:1-115,A:217-287
PDB: 6GNC chain A(all domains)
UniProt: Q97IU2 (all domains)
Gene: trxB

Molecule: Thioredoxin reductase

3D Structure

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Related Domains

Browse other domains in FAD_binding_2,Pyr_redox_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyFAD_binding_2,Pyr_redox_2(2003.1.2.8)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00890FAD_binding_2

FAD binding domain

ClanCL0063NADP_Rossmann

PF07992Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6GNC RCSB PDB: 6GNC PDBe: 6GNC UniProt: Q97IU2

Downloads

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