ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yz1B2 - ECOD Domain | ECOD

ECOD/Domains/e5yz1B2

e5yz1B2

UID: 002433563

PDB

Range: B:22-81,B:148-180
PDB: 5YZ1 chain B(all domains)
UniProt: A8K0B5 (all domains)

Molecule: Protein archease

3D Structure

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Related Domains

Browse other domains in Archease →

Classification

AArchitecturea+b two layers(a.11)

XX-groupMTH1598-like(256)

HH-groupMTH1598-like(256.1)

TT-groupMTH1598-like(256.1.1)

FFamilyArchease(256.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01951Archease

Archease protein family (MTH1598/TM1083)

ClanCL0319SHS2

External Links

ECOD PDB View: 5YZ1 RCSB PDB: 5YZ1 PDBe: 5YZ1 UniProt: A8K0B5

Downloads

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