ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6cfgB1 - ECOD Domain | ECOD

ECOD/Domains/e6cfgB1

e6cfgB1

UID: 002448169

PDB

Range: B:1-176
PDB: 6CFG chain B(all domains)
UniProt: A8UDR1 (all domains)
Gene: HA

Molecule: Hemagglutinin

3D Structure

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Related Domains

Browse other domains in Hemagglutinin →

Classification

AArchitecturealpha bundles(a.7)

XX-groupHemagglutinin HA2 chain(3847)

HH-groupHemagglutinin HA2 chain(3847.1)

TT-groupHemagglutinin HA2 chain(3847.1.1)

FFamilyHemagglutinin(3847.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only
N-[2-(2-{4-[(R)-(2-methyl-2H-tetrazol-5-yl)(phenyl)methyl]piperazine-1-carbonyl}pyridin-4-yl)-1,3-benzoxazol-5-yl]acetamideEZ7

+ 1 additive (DI(HYDROXYETHYL)ETHER)

Pfam Families

PF00509Hemagglutinin

Haemagglutinin

External Links

ECOD PDB View: 6CFG RCSB PDB: 6CFG PDBe: 6CFG UniProt: A8UDR1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.