ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6jddA1 - ECOD Domain | ECOD

ECOD/Domains/e6jddA1

e6jddA1

UID: 002455671

PDB

Range: A:2-188
PDB: 6JDD chain A(all domains)
UniProt: E5KIB9 (all domains)
Gene: cypD

Molecule: Cypemycin cysteine dehydrogenase (decarboxylating)

3D Structure

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Related Domains

Browse other domains in Flavoprotein →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHomo-oligomeric flavin-containing Cys decarboxylases, HFCD(7564)

HH-groupHomo-oligomeric flavin-containing Cys decarboxylases, HFCD(7564.1)

TT-groupHomo-oligomeric flavin-containing Cys decarboxylases, HFCD(7564.1.1)

FFamilyFlavoprotein(7564.1.1.1)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02441Flavoprotein

Flavoprotein

External Links

ECOD PDB View: 6JDD RCSB PDB: 6JDD PDBe: 6JDD UniProt: E5KIB9

Downloads

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