ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6cj6C1 - ECOD Domain | ECOD

ECOD/Domains/e6cj6C1

e6cj6C1

UID: 002456568

PDB

Range: C:4-164
PDB: 6CJ6 chain C(all domains)
UniProt: P24361 (all domains)
Gene: OPG053

Molecule: Protein F9

3D Structure

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Related Domains

Browse other domains in L1R_F9L →

Classification

AArchitecturealpha bundles(a.7)

XX-groupPoxvirus L1 protein(3607)

HH-groupPoxvirus L1 protein(3607.1)

TT-groupPoxvirus L1 protein(3607.1.1)

FFamilyL1R_F9L(3607.1.1.1)

Ligands

in contact, ≤ 4 Å

2-{2-[2-2-(Methoxy-Ethoxy)-Ethoxy]-Ethoxy}-EthanolETE
drugDrugBank DB04332
2-EthoxyethanolETX
drugDrugBank DB02249

Pfam Families

PF02442L1R_F9L

Lipid membrane protein of large eukaryotic DNA viruses

External Links

ECOD PDB View: 6CJ6 RCSB PDB: 6CJ6 PDBe: 6CJ6 UniProt: P24361

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,3-PropanediolPDO

drugDrugBank DB02774

(S)-propane-1,2-diolPGO

drugDrugBank DB04349

2-(2-METHOXYETHOXY)ETHANOLPG0

+ 7 additives (Ethanol, Glycerin, Heptaethylene glycol, …)

EthanolEOH
DrugBank DB00898
GlycerinGOL
DrugBank DB09462
Heptaethylene glycolP33
DrugBank DB03394
Triethylene glycolPGE
DrugBank DB02327
1,2-ETHANEDIOLEDO
MethanolMOH
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.