ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6i59A3 - ECOD Domain | ECOD

ECOD/Domains/e6i59A3

e6i59A3

UID: 002458435

PDB

Range: A:1177-1287
PDB: 6I59 chain A(all domains)
UniProt: Q00416 (all domains)
Gene: SEN1

Molecule: Helicase SEN1

3D Structure

Loading viewer...

Related Domains

Browse other domains in SEN1_barrel →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAlanine racemase-C(1.1.7)

FFamilySEN1_barrel(1.1.7.81)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Glycerin, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

GlycerinGOL
DrugBank DB09462
1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Pfam Families

PF23576SEN1_barrel

Helicase SEN1 beta-barrel domain

External Links

ECOD PDB View: 6I59 RCSB PDB: 6I59 PDBe: 6I59 UniProt: Q00416

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.