ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6i9aB1 - ECOD Domain | ECOD

ECOD/Domains/e6i9aB1

e6i9aB1

UID: 002459793

PDB

Range: B:600-681
PDB: 6I9A chain B(all domains)
UniProt: Q51817 (all domains)
Gene: kgp

Molecule: Lys-gingipain W83

3D Structure

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Related Domains

Browse other domains in Peptidase_C25_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyPeptidase_C25_C(11.1.1.62)

Ligands

in contact, ≤ 4 Å

Unknown atom or ionUNX

+ 2 additives (HEPES, Glycerol)

HEPESEPE
DrugBank DB16872
GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03785Peptidase_C25_C

Peptidase family C25, C terminal ig-like domain

ClanCL0159E-set

External Links

ECOD PDB View: 6I9A RCSB PDB: 6I9A PDBe: 6I9A UniProt: Q51817

Downloads

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