ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6h6jA1 - ECOD Domain | ECOD

ECOD/Domains/e6h6jA1

e6h6jA1

UID: 002470753

PDB

Range: A:0-149
PDB: 6H6J chain A(all domains)
UniProt: Q9ER97 (all domains)
Gene: Ngb

Molecule: Neuroglobin

3D Structure

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Related Domains

Browse other domains in Globin →

Classification

AArchitecturealpha arrays(a.6)

XX-groupGlobin-like(106)

HH-groupGlobin-like(106.1)

TT-groupGlobin-like(106.1.1)

FFamilyGlobin(106.1.1.1)

Ligands

in contact, ≤ 4 Å

Carbon monoxideCMO
drugDrugBank DB11588
FerrohemeHEM
drugDrugBank DB18267

+ 4 additives (Glycerin, Sulfate ion, Tromethamine, …)

Pfam Families

Globin

ClanCL0090Globin

External Links

ECOD PDB View: 6H6J RCSB PDB: 6H6J PDBe: 6H6J UniProt: Q9ER97

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546
TromethamineTRS
DrugBank DB03754
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.