ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6imvB1 - ECOD Domain | ECOD

ECOD/Domains/e6imvB1

e6imvB1

UID: 002470804

PDB

Range: B:24-517
PDB: 6IMV chain B(all domains)
UniProt: A0A4V8H012 (all domains)

Molecule: Endo-beta-1,2-glucanase

3D Structure

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Related Domains

Browse other domains in SGL_GH162 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilySGL_GH162(109.2.1.60)

Ligands

in contact, ≤ 4 Å

Beta-D-GlucoseBGC
drugDrugBank DB02379
N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 1 additive (DI(HYDROXYETHYL)ETHER)

Pfam Families

PF26157SGL_GH162

Endo-beta-1,2-glucanase SGL

ClanCL00596_Hairpin

External Links

ECOD PDB View: 6IMV RCSB PDB: 6IMV PDBe: 6IMV UniProt: A0A4V8H012

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.