ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6oebA1 - ECOD Domain | ECOD

ECOD/Domains/e6oebA1

e6oebA1

UID: 002470998

PDB

Range: A:2-270
PDB: 6OEB chain A(all domains)
UniProt: Q96FZ2 (all domains)
Gene: HMCES

Molecule: Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein

3D Structure

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Related Domains

Browse other domains in SRAP →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupBB1717-like(4188)

HH-groupBB1717-like(4188.1)

TT-groupBB1717-like(4188.1.1)

FFamilySRAP(4188.1.1.1)

Ligands

in contact, ≤ 4 Å

Unknown atom or ionUNX

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

SOS response associated peptidase (SRAP)

External Links

ECOD PDB View: 6OEB RCSB PDB: 6OEB PDBe: 6OEB UniProt: Q96FZ2

Downloads

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