ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6r7rC1 - ECOD Domain | ECOD

ECOD/Domains/e6r7rC1

e6r7rC1

UID: 002473323

PDB

Range: C:3-430
PDB: 6R7R chain C(all domains)
UniProt: Q5JID0 (all domains)
Gene: TK0986

Molecule: Proton/glutamate symporter, SDF family

3D Structure

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Related Domains

Browse other domains in SDF →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupProton glutamate symport protein(5052)

HH-groupProton glutamate symport protein(5052.1)

TT-groupProton glutamate symport protein(5052.1.1)

FFamilySDF(5052.1.1.1)

Ligands

in contact, ≤ 4 Å

D-Aspartic AcidDAS
drugDrugBank DB02655
Sodium ionNA
metal

+ 2 additives (DI(HYDROXYETHYL)ETHER, Triethylene glycol)

DI(HYDROXYETHYL)ETHERPEG

Pfam Families

Sodium:dicarboxylate symporter family

External Links

ECOD PDB View: 6R7R RCSB PDB: 6R7R PDBe: 6R7R UniProt: Q5JID0

Downloads

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Triethylene glycolPGE

Shown in the structure viewer. Drug annotations from DrugDomain.